The PHENIX software suite is a highly automated system for macromolecular structure determination that can rapidly arrive at an initial partial model of a structure without significant human intervention, given moderate resolution and good quality data.
Type module avail Phenix at the prompt
How To Use
Phenix can be run standalone or as a GUI through the X-windows interface (see here for more information about X-windows on Helix Systems).
Phenix uses environment modules. Typemodule load Phenix
then type coot at the prompt, input is menu-driven:[helix]$ phenix