Scientific Databases

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Database	Type	Location on the Helix Systems	Last Updated
EMBOSS databases Accessible via EMBOSS web interface & EMBOSS command-line
EST EST division of Genbank	Nuc	/fdb/embossdb/est.new	30 Oct 2009 (Updated bimonthly after Genbank release Source:NCBI )
Gb_New All sequences added to Genbank since last major release	Nuc	/fdb/embossdb/gbnew.new	24 Nov 2009 (Updated daily Source:NCBI )
Genbank The NIH Genetic Sequence Database, an annotated collection of all publicly available DNA sequences. More information at NCBI.	Nuc	/fdb/embossdb/genbank.new	21 Oct 2009 (Updated bimonthly after Genbank release Source:NCBI )
Refseqnt NCBI's comprehensive, integrated, non-redundant set of sequences, including genomic DNA, transcript (RNA) for major research organisms.	Nuc	/fdb/embossdb/refseqnt.new	18 Nov 2009 (Updated weekly Source:NCBI)
Prints Protein fingerprints, groups of conserved motifs used to characterize a protein family.	Patterns	used internally by Emboss	18 Nov 2009 (Updated after new Prints release Source:EBI)
Prosite A database/dictionary of protein sites and patterns. More information at Expasy.	Patterns	used internally by Emboss	18 Nov 2009 (Updated every 2 months Source:Expasy )
REBASE About restriction enzymes, recognition sequences, cleavage sites... More information at REBASE.	Enzymes	used internally by Emboss	18 Nov 2009 (Updated every month Source:REBASE )
Transfac Transcription factor database, most recent version from www.biobase.de.	Info	used internally by Emboss	04 Sep 2009 (Updated with new Transfac release. Source:Biobase )
GenPept GenPept is produced by parsing the corresponding GenBank release for translated coding regions of GenBank sequences. More information at NCI, Frederick	Prot	/fdb/embossdb/genpept.new	28 Oct 2009 (Updated bimonthly after Genbank release Source:NCIFCRF)
GP_New All sequences added to GenPept since last major release	Prot	/fdb/embossdb/gpnew.new	24 Nov 2009 (Updated daily Source:NCIFCRF )
Refseqaa NCBI's comprehensive, integrated, non-redundant set of protein sequences for major research organisms.	Prot	/fdb/embossdb/refseqaa.new	18 Nov 2009 (Updated weekly Source:NCBI)
UniProt (Swissprot + Trembl) A highly-annotated, curated protein sequence database. Minimal redundancy and high level of integration with other databases. More information at Expasy	Prot	/fdb/embossdb/uniprot	04 Nov 2009 (Updated weekly Source:Uniprot)
Blast databases Accessible via Blast (Helix) Blast (Biowulf)
Drosophila Drosophila sequences	Nuc	/fdb/blastdb/drosoph.nt	25 Jul 2005 (Updated weekly Source:NCBI )
E.Coli E.Coli sequences	Nuc	/fdb/blastdb/ecoli.nt	25 Jul 2005 (Updated weekly Source:NCBI )
E.Coli E.Coli sequences	Nuc	/fdb/blastdb/ecoli.nt	25 Jul 2005 (Updated weekly Source:NCBI )
EST - human Human sequences from the EST division of Genbank	Nuc	/fdb/blastdb/est_human	19 Nov 2009 (Updated weekly Source:NCBI )
EST - mouse Mouse sequences from the EST division of Genbank.	Nuc	/fdb/blastdb/est_mouse	19 Nov 2009 (Updated weekly Source:NCBI )
EST - others Non-human, non-mouse sequences from the EST division of Genbank	Nuc	/fdb/blastdb/est_others	19 Nov 2009 (Updated weekly Source:NCBI )
HTGs High throughput genome sequences	Nuc	/fdb/blastdb/htgs	17 Nov 2009 (Updated weekly Source:NCBI )
Human Genome Build 36, hg18 (April 2006) from the International Human Genome Consortium	Nuc	/fdb/blastdb/hs_genome	01 May 2006 (Updated after new build release Source:UCSC )
Human Genome RNA Build 36, hg18 (April 2006) from the International Human Genome Consortium	Nuc	/fdb/blastdb/hs_genome.rna	11 Aug 2009 (Updated after build release Source:NCBI )
Mito Mitochondrial sequences	Nuc	/fdb/blastdb/mito.nt	25 Jul 2005 (Updated weekly Source:NCBI )
Mouse Genome Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Nuc	/fdb/blastdb/mouse_genome	25 Mar 2008 (Updated after new build release Source:UCSC )
Mouse Genome RNA Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Nuc	/fdb/blastdb/mouse_genome.rna	26 Mar 2008 (Updated after release Source:NCBI )
NCBI nt All GenBank+EMBL+DDBJ (but no EST, STS, GSS, HTG). No longer nonredundant.	Nuc	/fdb/blastdb/nt	18 Nov 2009 (Updated weekly Source:NCBI )
Protein Data Bank An archive of experimentally determined three-dimensional strtures of biological macromolecules. More information at the PDB.	Nuc	/fdb/blastdb/pdbnt	19 Nov 2009 (Updated weekly Source:NCBI )
Refseq Human Genomic Refseq Human (NC_######) chromosome records with gap adjusted concatenated NT_ contigs	Nuc	/fdb/blastdb/human_genomic	19 Nov 2009 (Updated weekly Source:NCBI)
Refseq Human RNA A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Nuc	/fdb/blastdb/human.rna	23 Nov 2009 (Updated weekly Source:NCBI)
Refseq Mouse RNA A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Nuc	/fdb/blastdb/mouse.rna	23 Nov 2009 (Updated weekly Source:NCBI)
Refseq Other Genomic RefSeq chromosome records (NC_######) for organisms other than human	Nuc	/fdb/blastdb/other_genomic	17 Nov 2009 (Updated weekly Source:NCBI )
UniVec Core A non-redundant database of sequences commonly attached to cDNA or genomic DNA during the cloning process. Includes only oligonucleotides and vectors consisting of bacterial, phage, viral, yeast or synthetic sequences, but not vectors that include sequences of mammalian origin.	Nuc	/fdb/blastdb/univec_core	28 Apr 2008 (Updated once Source:NCBI)
Yeast Yeast sequences	Nuc	/fdb/blastdb/yeast.nt	25 Jul 2005 (Updated weekly Source:NCBI )
Drosophila Drosophila sequences	Prot	/fdb/blastdb/drosoph.aa	25 Jul 2005 (Updated weekly Source:NCBI )
E.Coli E.Coli sequences	Prot	/fdb/blastdb/ecoli.aa	19 Mar 2006 (Updated weekly Source:NCBI )
Human Genome Proteins Build 36, hg18 (April 2006) from the International Human Genome Consortium	Prot	/fdb/blastdb/hs_genome.protein	11 Aug 2009 (Updated after build release Source:NCBI )
Mito Mitochondrial sequences	Prot	/fdb/blastdb/mito.aa	25 Jul 2005 (Updated weekly Source:NCBI )
Mouse Genome Proteins Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Prot	/fdb/blastdb/mouse_genome.protein	26 Mar 2008 (Updated weekly Source:NCBI )
NCBI nr NCBI's nonredundant Genbank CDS translations + PDB + SwissProt	Prot	/fdb/blastdb/nr	19 Nov 2009 (Updated weekly Source:NCBI )
Protein Data Bank An archive of experimentally determined three-dimensional strtures of biological macromolecules. More information at the PDB.	Prot	/fdb/blastdb/pdbaa	19 Nov 2009 (Updated weekly Source:NCBI )
Refseq Human Proteins A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Prot	/fdb/blastdb/human.protein	23 Nov 2009 (Updated weekly Source:NCBI)
Refseq Mouse Proteins A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Prot	/fdb/blastdb/mouse.protein	23 Nov 2009 (Updated weekly Source:NCBI)
SwissProt A highly-annotated, curated protein sequence database. Minimal redundancy and high level of integration with other databases. More information at Expasy	Prot	/fdb/blastdb/swissprot	19 Nov 2009 (Updated weekly Source:NCBI)
Yeast Yeast sequences	Prot	/fdb/blastdb/yeast.aa	25 Jul 2005 (Updated weekly Source:NCBI )
Fasta databases Accessible via Fasta, BLAT. User programs.
Drosophila Drosophila sequences	Nuc	/fdb/fastadb/drosoph.nt.fas	25 Jul 2005 (Updated weekly Source:NCBI )
E.Coli E.Coli sequences	Nuc	/fdb/fastadb/ecoli.nt.fas	25 Jul 2005 (Updated weekly Source:NCBI )
EST - human Human sequences from the EST division of Genbank.	Nuc	/fdb/fastadb/est_human.fas	24 Nov 2009 (Updated weekly Source:NCBI )
EST - mouse Mouse sequences from the EST division of Genbank.	Nuc	/fdb/fastadb/est_mouse.fas	24 Nov 2009 (Updated weekly Source:NCBI )
Human Genome Build 36, hg18 (April 2006) from the International Human Genome Consortium	Nuc	/fdb/genome/human-apr2006/	01 May 2006 (Updated after new build release Source:UCSC)
Human Genome RNA Build 36, hg18 (April 2006) from the International Human Genome Consortium	Nuc	/fdb/fastadb/hs_genome.rna.fas	28 Apr 2006 (Updated after build release Source:NCBI )
Mito Mitochondrial sequences	Nuc	/fdb/fastadb/mito.nt.fas	25 Jul 2005 (Updated weekly Source:NCBI )
Mouse Genome Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Nuc	/fdb/genome/mouse-mar2006/	26 Mar 2008 (Updated after new build release Source:UCSC )
Mouse Genome RNA Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Nuc	/fdb/fastadb/mouse_genome.rna.fas	25 Mar 2008 (Updated after release Source:NCBI )
NCBI nt All GenBank+EMBL+DDBJ (but no EST, STS, GSS, HTG). No longer nonredundant.	Nuc	/fdb/fastadb/nt.fas	24 Nov 2009 (Updated weekly Source:NCBI )
Protein Data Bank An archive of experimentally determined three-dimensional strtures of biological macromolecules. More information at the PDB.	Nuc	/fdb/fastadb/pdb.nt.fas	24 Nov 2009 (Updated weekly Source:NCBI )
Refseq Human Genomic Refseq Human (NC_######) chromosome records with gap adjusted concatenated NT_ contigs	Nuc	/fdb/fastadb/ref.human.genomic.fas	24 Nov 2009 (Updated weekly Source:NCBI)
Refseq Human RNA A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Nuc	/fdb/fastadb/ref.human.rna.fas	24 Nov 2009 (Updated weekly Source:NCBI)
Refseq Mouse RNA A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Nuc	/fdb/fastadb/ref.mouse.rna.fas	24 Nov 2009 (Updated weekly Source:NCBI)
Refseq Other Genomic RefSeq chromosome records (NC_######) for organisms other than human	Nuc	/fdb/fastadb/ref.other.genomic.fas	24 Nov 2009 (Updated weekly Source:NCBI)
Yeast Yeast sequences	Nuc	/fdb/fastadb/yeast.nt.fas	25 Jul 2005 (Updated weekly Source:NCBI )
Drosophila Drosophila sequences	Prot	/fdb/fastadb/drosoph.aa.fas	25 Jul 2005 (Updated weekly Source:NCBI )
E.Coli E.Coli sequences	Prot	/fdb/fastadb/ecoli.aa.fas	25 Jul 2005 (Updated weekly Source:NCBI )
Human Genome Proteins Build 36, hg18 (April 2006) from the International Human Genome Consortium	Prot	/fdb/fastadb/hs_genome.protein.fas	28 Apr 2006 (Updated after build release Source:NCBI )
Mito Mitochondrial sequences	Prot	/fdb/fastadb/mito.aa.fas	25 Jul 2005 (Updated weekly Source:NCBI )
Mouse Genome Proteins Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Prot	/fdb/fastadb/mouse_genome.protein.fas	25 Mar 2008 (Updated weekly Source:NCBI )
NCBI nr NCBI's nonredundant Genbank CDS translations + PDB + SwissProt	Prot	/fdb/fastadb/nr.aa.fas	24 Nov 2009 (Updated weekly Source:NCBI )
Protein Data Bank An archive of experimentally determined three-dimensional strtures of biological macromolecules. More information at the PDB.	Prot	/fdb/fastadb/pdb.aa.fas	24 Nov 2009 (Updated weekly Source:NCBI )
Refseq Human Proteins A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Prot	/fdb/fastadb/ref.human.protein.fas	24 Nov 2009 (Updated weekly Source:NCBI)
Refseq Mouse Proteins A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Prot	/fdb/fastadb/ref.mouse.protein.fas	24 Nov 2009 (Updated weekly Source:NCBI)
SwissProt A highly-annotated, curated protein sequence database. Minimal redundancy and high level of integration with other databases. More information at Expasy	Prot	/fdb/fastadb/swissprot.aa.fas	24 Nov 2009 (Updated weekly Source:NCBI )
Yeast Yeast sequences	Prot	/fdb/fastadb/yeast.aa.fas	25 Jul 2005 (Updated weekly Source:NCBI )
Mascot databases Accessible via Mascot search engine
MSDB A nonredundant protein sequence database designed specifically for mass-spec applications.	Prot	biospec.nih.gov	20 Jun 2008 (Updated weekly Source:NCBI )
NCBI nr NCBI's nonredundant Genbank CDS translations + PDB + SwissProt	Prot	biospec.nih.gov	24 Nov 2009 (Updated weekly Source:NCBI )
NIH-Specific A collection of NIH-specific databases requested by NIH Mascot users.	Prot	biospec.nih.gov	13 Nov 2009 (Updated as requested Source:NIH)
Sp_Trembl SwissProt + Trembl (a computer-annotated supplement of SwissProt)	Prot	biospec.nih.gov	08 Nov 2009 (Updated weekly Source:Expasy )
SwissProt A highly-annotated, curated protein sequence database. Minimal redundancy and high level of integration with other databases. More information at Expasy	Prot	biospec.nih.gov	08 Nov 2009 (Updated weekly Source:Expasy )
PDB databases Accessible via Molecules R Us or direct access to coordinate files. NIH users can NFS-mount the PDB databases on their own machines -- contact staff@helix.nih.gov for more info.
Protein Data Bank An archive of experimentally determined three-dimensional strtures of biological macromolecules. More information at the PDB.	3-D	/pdb/pdb	25 Nov 2009 (Updated daily Source:PDB )
CSD databases Accessible via Quest
Cambridge Structural Database Crystal structure information for over 165,000 organic and organometallic compounds. More info at CCDC.	3-D	/local/csd	03 Apr 2009 (Updated every 3 months Source:CCDC)
PFAM databases Accessible via HMMER (Biowulf, Helix)
PFAM A collection of multiple sequence alignments and hidden Markov models. More information at PFAM home page	Families	/fdb/fastadb/pfam	23 Mar 2009 (Updated every 3 months Source:PFAM )
WU-Blast databases Accessible via WU-Blast
Drosophila Drosophila sequences	Prot	/fdb/wublastdb/drosoph.aa	25 Aug 2009 (Updated weekly Source:NCBI )
E.Coli E.Coli sequences	Prot	/fdb/wublastdb/ecoli.aa	25 Aug 2009 (Updated weekly Source:NCBI )
Human Genome Proteins Build 36, hg18 (April 2006) from the International Human Genome Consortium	Prot	/fdb/wublastdb/hs_genome.protein	01 May 2006 (Updated after build release Source:NCBI )
Mito Mitochondrial sequences	Prot	/fdb/wublastdb/mito.aa	29 Oct 2008 (Updated weekly Source:NCBI )
Mouse Genome Proteins Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Prot	/fdb/wublastdb/mouse_genome.protein	25 Mar 2008 (Updated weekly Source:NCBI )
NCBI nr NCBI's nonredundant Genbank CDS translations + PDB + SwissProt	Prot	/fdb/wublastdb/nr	24 Nov 2009 (Updated weekly Source:NCBI )
Protein Data Bank An archive of experimentally determined three-dimensional strtures of biological macromolecules. More information at the PDB.	Prot	/fdb/wublastdb/pdb.aa	24 Nov 2009 (Updated weekly Source:NCBI )
Refseq Human Proteins A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Prot	/fdb/wublastdb/ref.human.protein	24 Nov 2009 (Updated weekly Source:NCBI)
Refseq Mouse Proteins A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Prot	/fdb/wublastdb/ref.mouse.protein	24 Nov 2009 (Updated weekly Source:NCBI)
SwissProt A highly-annotated, curated protein sequence database. Minimal redundancy and high level of integration with other databases. More information at Expasy	Prot	/fdb/wublastdb/swissprot.aa	24 Nov 2009 (Updated weekly Source:NCBI )
Yeast Yeast sequences	Prot	/fdb/wublastdb/yeast.aa	25 Aug 2009 (Updated weekly Source:NCBI )
Drosophila Drosophila sequences	Nuc	/fdb/wublastdb/drosoph.nt	25 Aug 2009 (Updated weekly Source:NCBI )
E.Coli E.Coli sequences	Nuc	/fdb/wublastdb/ecoli.nt	25 Aug 2009 (Updated weekly Source:NCBI )
EST - human Human sequences from the EST division of Genbank.	Nuc	/fdb/wublastdb/est_human	24 Nov 2009 (Updated weekly Source:NCBI )
EST - mouse Mouse sequences from the EST division of Genbank.	Nuc	/fdb/wublastdb/est_mouse	24 Nov 2009 (Updated weekly Source:NCBI )
Human Genome Build 36, hg18 (April 2006) from the International Human Genome Consortium	Nuc	/fdb/wublastdb/hs_genome	01 May 2006 (Updated weekly Source:UCSC)
Human Genome RNA Build 36, hg18 (April 2006) from the International Human Genome Consortium	Nuc	/fdb/wublastdb/hs_genome.rna	01 May 2006 (Updated after build release Source:NCBI )
Mito Mitochondrial sequences	Nuc	/fdb/wublastdb/mito.nt	25 Aug 2009 (Updated weekly Source:NCBI )
Mouse Genome Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Nuc	/fdb/wublastdb/mouse_genome	25 Mar 2008 (Updated after new build release Source:UCSC )
Mouse Genome RNA Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Nuc	/fdb/wublastdb/mouse.rna	25 Mar 2008 (Updated after release Source:NCBI )
NCBI nt All GenBank+EMBL+DDBJ (but no EST, STS, GSS, HTG). No longer nonredundant.	Nuc	/fdb/wublastdb/nt	24 Nov 2009 (Updated weekly Source:NCBI )
Protein Data Bank An archive of experimentally determined three-dimensional strtures of biological macromolecules. More information at the PDB.	Nuc	/fdb/wublastdb/pdb.nt	24 Nov 2009 (Updated weeekly Source:NCBI )
Refseq Human RNA A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Nuc	/fdb/wublastdb/ref.human.rna	24 Nov 2009 (Updated weekly Source:NCBI)
Refseq Mouse RNA A comprehensive, integrated, non-redundant set of sequences. More info at NCBI	Nuc	/fdb/wublastdb/ref.mouse.rna	24 Nov 2009 (Updated weekly Source:NCBI)
Yeast Yeast sequences	Nuc	/fdb/wublastdb/yeast.nt	25 Aug 2009 (Updated weekly Source:NCBI )
MySQL databases Accessible via NIH mirror of UCSC Genome Browser Also available for direct MySQL queries from the Biowulf cluster nodes.
Chicken Genome May 2006 assembly from WUSTL.	Nuc	NIH mirror of UCSC Genome Browser	30 Dec 2007 (Updated weekly Source:UCSC )
Cow Genome Mar 2005 assembly from the Baylor Sequencing Center	Nuc	NIH mirror of UCSC genome browser	24 Mar 2008 (Updated weekly Source:UCSC )
Dog Genome May 2005 assembly from the Broad Institute	Nuc	NIH mirror of UCSC genome browser	30 Dec 2007 (Updated weekly Source:UCSC )
Human Genome Build 36, hg18 (April 2006) from the International Human Genome Consortium	Nuc	NIH mirror of UCSC genome browser	23 Jul 2009 (Updated weekly Source:UCSC )
Mouse Genome Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Nuc	NIH mirror of UCSC genome browser	01 Oct 2009 (Updated weekly Source:UCSC )
Rat Genome May 2006 build, rn4, from the Rat Genome Sequencing Consortium	Nuc	NIH mirror of UCSC genome browser	29 Dec 2007 (Updated weekly Source:UCSC )
Rhesus genome Jan 2006 assembly from the Baylor Sequencing Center.	Nuc	NIH mirror of UCSC genome browser	29 Dec 2007 (Updated weekly Source:UCSC )
Zebrafish genome Mar 2006 assembly from the Sanger Center.	Nuc	NIH mirror of UCSC genome browser	30 Dec 2007 (Updated weekly Source:UCSC )
Chicken Genome May 2006 assembly from WUSTL.	Prot	NIH mirror of UCSC Genome Browser	30 Dec 2007 (Updated weekly Source:UCSC )
Cow Genome Aug 2006 assembly from the Baylor Sequencing Center	Prot	NIH mirror of UCSC genome browser	24 Mar 2008 (Updated weekly Source:UCSC )
Dog Genome May 2005 assembly from the Broad Institute	Prot	NIH mirror of UCSC genome browser	30 Dec 2007 (Updated weekly Source:UCSC )
Human Genome Build 36, hg18 (April 2006) from the International Human Genome Consortium	Prot	NIH mirror of UCSC genome browser	23 Jul 2009 (Updated weekly Source:UCSC )
Mouse Genome Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Prot	NIH mirror of UCSC genome browser	01 Oct 2009 (Updated weekly Source:UCSC )
Rat Genome May 2006 build, rn4, from the Rat Genome Sequencing Consortium	Prot	NIH mirror of UCSC genome browser	29 Dec 2007 (Updated weekly Source:UCSC )
Rhesus genome Jan 2006 assembly from the Baylor Sequencing Center.	Prot	NIH mirror of UCSC genome browser	29 Dec 2007 (Updated weekly Source:UCSC )
Zebrafish genome Mar 2006 assembly from the Sanger Center.	Prot	NIH mirror of UCSC genome browser	30 Dec 2007 (Updated weekly Source:UCSC )
Chicken Genome May 2006 assembly from WUSTL.	Annotations	NIH mirror of UCSC Genome Browser	30 Dec 2007 (Updated weekly Source:UCSC )
Cow Genome Mar 2005 assembly from the Baylor Sequencing Center	Annotations	NIH mirror of UCSC genome browser	24 Mar 2008 (Updated weekly Source:UCSC )
Dog Genome May 2005 assembly from the Broad Institute	Annotations	NIH mirror of UCSC genome browser	30 Dec 2007 (Updated weekly Source:UCSC )
Drosophila genome April 2006 assembly	Annotations	NIH mirror of UCSC genome browser	17 Jul 2009 (Updated weekly Source:UCSC)
Human Genome Build 36, hg18 (April 2006) from the International Human Genome Consortium	Annotations	NIH mirror of UCSC genome browser	23 Jul 2009 (Updated weekly Source:UCSC)
Mouse Genome Build 37, mm9, Jul 2007 from the Mouse Genome Consortium	Annotations	NIH mirror of UCSC genome browser	01 Oct 2009 (Updated weekly Source:UCSC )
Rat Genome May 2006 build, rn4, from the Rat Genome Sequencing Consortium	Annotations	NIH mirror of UCSC genome browser	29 Dec 2007 (Updated weekly Source:UCSC )
Rhesus genome Jan 2006 assembly from the Baylor Sequencing Center.	Annotations	NIH mirror of UCSC genome browser	29 Dec 2007 (Updated weekly Source:UCSC )
Zebrafish genome Mar 2006 assembly from the Sanger Center.	Annotations	NIH mirror of UCSC genome browser	30 Dec 2007 (Updated weekly Source:UCSC )

EMBOSS databases

Blast databases

Fasta databases

Mascot databases

PDB databases

CSD databases

PFAM databases

WU-Blast databases

MySQL databases