Analyze for Linkage on Helix
Analyze is a collection of linkage and association software made available by Tero Hiekkalinna
Programs including:
analprep
downfreq
extract
homog
homogpos
homogpre
hrrlamb
hrrlambprep
hrrmult
hrrprep
interpretation
locusorder
multihomog
multihomogint
multihomogprep
multilink
multilinkpos
multilinkprep
nonparamint
nonparamprep
pedprepare
polylocus
sib2link
sibpairna
sibprepna
tdtlikena
The environment variable(s) need to be set properly first. The easiest way to do this is by using the modules commands as in the example below.
$ module avail analyze_linux ------------------------ /usr/local/Modules/3.2.9/modulefiles---------------------------- analyze_linux $ module load analyze_linux $ module list Currently Loaded Modulefiles:
1) analyze_linux $ module unload analyze_linux $ module show analyze_linux ------------------------------------------------------------------- /usr/local/Modules/3.2.9/modulefiles/analyze_linux: module-whatis Sets up Analyze_linux prepend-path PATH /usr/local/apps/analyze_linux -------------------------------------------------------------------
